Code Model Coverage Tracker

CHIME-penn-full

Total Supported Lines: 1080/1080 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
penn_chime/cli.py	26	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
penn_chime/constants.py	21	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/parameters.py	466	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/sir.py	426	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/__init__.py	0	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/validators/base.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/validators/validators.py	101	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
penn_chime/model/validators/__init__.py	24	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

CHIME-SIR

Total Supported Lines: 633/633 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Report	Preprocessed Gromet
CHIME_SIR-old.py	104	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SIR.py	253	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SIR_core.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SIR_while_loop.py	267	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet

CHIME-SVIIvR

Total Supported Lines: 539/539 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Report	Preprocessed Gromet
CHIME_SVIIvR.py	314	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SVIIvR_core.py	35	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SVIIvR_dynamics.py	59	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
CHIME_SVIIvR_while_loop.py	131	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet

ABM-COmplexVID-19

Total Supported Lines: 1133/1133 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Report	Preprocessed Gromet
COmplexVID-19/comunities.py	352	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COmplexVID-19/dynamics_OTM.py	285	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COmplexVID-19/model.py	141	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COmplexVID-19/run.py	355	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet

ABM-COVID-ABS

Total Supported Lines: 1989/2729 (72.88384023451813%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Report	Preprocessed Gromet
COVID19_AgentBasedSimulation/run_batch.py	679	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/setup.py	30	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/abs.py	415	✗	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/agents.py	78	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/common.py	27	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/experiments.py	216	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/graphics.py	452	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/util.py	5	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/__init__.py	0	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/network/agents.py	415	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/network/graph_abs.py	325	✗	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/network/util.py	87	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
COVID19_AgentBasedSimulation/covid_abs/network/__init__.py	0	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet

MechBayes

Total Supported Lines: 0/0 (0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet

SIDARTHE

Total Supported Lines: 193/193 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
commented_Evaluation_Scenario_2.1.a.ii-Code_Version_A.py	117	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
Evaluation_Scenario_2.1.a.ii-Code_Version_A.py	76	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

Simple-SIR

Total Supported Lines: 53/53 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
Simple_SIR.py	53	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

Climlab-v1

Total Supported Lines: 4306/4306 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
climlab-v1/domain/axis.py	217	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/domain/domain.py	649	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/domain/field.py	281	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/domain/initial.py	167	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/domain/xarray.py	79	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/domain/__init__.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/diagnostic.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/energy_budget.py	146	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/external_forcing.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/implicit.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/process.py	857	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/time_dependent_process.py	520	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/process/__init__.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/constants.py	91	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/heat_capacity.py	100	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/legendre.py	184	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/thermo.py	222	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/walk.py	111	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/__init__.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/default.py	130	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/dictionary.py	60	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/mapping.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/merge.py	44	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/mixins.py	209	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
climlab-v1/utils/attrdict/__init__.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

Climlab-v2

Total Supported Lines: 11282/12934 (87.22746250193289%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
climlab-v2/__init__.py	27	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/convection/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/convection/__init__.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/convection/akmaev_adjustment.py	144	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/convection/convadj.py	120	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/convection/emanuel_convection.py	255	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/__init__.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/axis.py	217	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/domain.py	643	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/field.py	281	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/initial.py	163	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/domain/xarray.py	79	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/__init__.py	29	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/adv_diff_numerics.py	428	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/advection_diffusion.py	255	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/budyko_transport.py	71	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/meridional_advection_diffusion.py	81	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/meridional_heat_diffusion.py	100	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/dynamics/meridional_moist_diffusion.py	151	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/model/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/model/__init__.py	27	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/model/column.py	192	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/model/ebm.py	835	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/model/stommelbox.py	37	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/__init__.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/diagnostic.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/energy_budget.py	146	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/external_forcing.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/implicit.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/process.py	857	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/process/time_dependent_process.py	518	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/__init__.py	16	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/absorbed_shorwave.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/aplusbt.py	322	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/boltzmann.py	199	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/cam3.py	229	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/greygas.py	230	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/insolation.py	686	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/nband.py	323	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/radiation.py	304	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/__init__.py	40	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/rrtmg.py	242	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/rrtmg_lw.py	167	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/rrtmg_sw.py	238	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/setup.py	12	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/rrtm/utils.py	104	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/transmissivity.py	193	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/radiation/water_vapor.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/__init__.py	5	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/insolation.py	328	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital/__init__.py	43	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital/long.py	48	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital/setup.py	12	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital/table.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/solar/orbital_cycles.py	170	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/surface/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/surface/__init__.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/surface/albedo.py	385	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/surface/surface_radiation.py	39	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/surface/turbulent.py	199	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_advdiff_solver.py	94	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_bandrc.py	90	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_cam3rad.py	72	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_domain2D.py	101	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_ebm.py	134	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_emanuel_convection.py	153	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_grey_radiation.py	96	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_insolation.py	100	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_rcm.py	99	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_rrtm.py	218	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/test_thermo.py	35	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/tests/xarray_test.py	12	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/__init__.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/	0	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/__init__.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/default.py	130	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/dictionary.py	60	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/mapping.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/merge.py	44	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/attrdict/mixins.py	209	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/constants.py	91	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/heat_capacity.py	100	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/legendre.py	184	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/thermo.py	222	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
climlab-v2/utils/walk.py	111	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

Examples-Python

Total Supported Lines: 256/256 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
assign_keyword1/assign_keyword1.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
assign_operator1/assign_operator1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
class1/class1.py	26	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
class2/class2.py	19	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
class3/class3.py	18	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
cond1/cond1.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cond2/cond2.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cond_compound1/cond_compound1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cond_compound2/cond_compound2.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cond_compound3/cond_compound3.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
dict1/dict1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
dso_kmeans/sklearn_clustering_kmeans.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
ellipsis1/ellipsis1.py	18	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
exp0/exp0.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
exp1/exp1.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
exp2/exp2.py	2	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
exp3/exp3.py	2	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
for1/for1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
for2/for2.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun1/fun1.py	3	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun2/fun2.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun3/fun3.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun4/fun4.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun_default1/fun_default1.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun_first_class_arg/fun_first_class_arg.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
fun_nested_def/fun_nested_def.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
import1/import1.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
import2/import2.py	5	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
import3/import3.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
import4/import4.py	5	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
recurse1/recurse1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
recurse2/recurse2.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
slice1/slice1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
unpack1/unpack1.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
while1/while1.py	4	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
while2/while2.py	5	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
while3/while3.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

Generated-Halfar

Total Supported Lines: 128/128 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
halfar_1d_v1.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
halfar_3d_v1.py	57	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
halfar_dome_1d_v1.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet

SV2AIR3-Waterloo-MATLAB

Total Supported Lines: 1020/1020 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Report	Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/get_beta.m	97	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/get_vaccine_rate.m	42	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/plot_data.m	233	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/shade.m	285	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/svair.m	70	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/svir.m	47	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet
SARS-CoV-2-variants-of-concern-in-Ontario/voc2_driver.m	246	✓	Open Parse Tree	Open CAST	Open Gromet	Open Gromet Report	Open Preprocessed Gromet

Bucky

Total Supported Lines: 7537/7537 (100.0%)

Can ingest system into single GrometFNModuleCollection: True

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
config.py	246	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
exceptions.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
numerical_libs.py	298	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
postprocess.py	177	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
_typing.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
__init__.py	2	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
__main__.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/cfg.py	12	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/data.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/main.py	91	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/run.py	85	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/typer_utils.py	68	✓	Open Parse Tree	Open CAST	Open Gromet	2	Open Gromet Report	Open Preprocessed Gromet
cli/viz.py	83	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
cli/__main__.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
data/adm_mapping.py	157	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
data/clean_historical_data.py	406	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
data/timeseries.py	346	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
data/__init__.py	3	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/bin_bridged_race_census_csv.py	45	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/csse_timeseries.py	103	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/extract_shapefile_data.py	90	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/hhs_hosp_cleanup.py	46	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/prem_2020_csv.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
datasource_transforms/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/adjmat.py	109	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/data.py	218	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/derived_epi_params.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/estimation.py	326	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/exceptions.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/io.py	141	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/main.py	759	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/mc_instance.py	135	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/npi.py	120	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/rhs.py	106	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/state.py	119	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/vacc.py	361	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
model/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/age_interp.py	18	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/array_utils.py	51	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/async_thread.py	69	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/cached_prop.py	29	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/data_sync.py	247	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/detect_cupy.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/distributions.py	114	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
util/extrapolate.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	16	Open Gromet Report	Open Preprocessed Gromet
util/fractional_slice.py	31	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/import_by_name.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/loess.py	77	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/nested_dict.py	247	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/ode_constraints.py	72	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/power_transforms.py	170	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/scoring.py	98	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/spline_smooth.py	755	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/util.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/working_directory.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
util/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
viz/plot.py	387	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
viz/readable_col_names.py	36	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
viz/utils.py	218	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
viz/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

ABM-REINA

Total Supported Lines: 4231/7078 (59.7767730997457%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
reina-model/corona.py	627	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/graphql_backend.py	48	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/graphql_schema.py	508	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/scenarios.py	200	✓	Open Parse Tree	Open CAST	Open Gromet	2	Open Gromet Report	Open Preprocessed Gromet
reina-model/simulation_thread.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/test_graphql.py	159	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/variables.py	536	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/datasets.py	300	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/simulation.py	469	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/simulation_numba.py	840	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/sir.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/utils.py	177	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/calc/__init__.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/cache.py	48	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/exceptions.py	2	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/interventions.py	376	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/locale.py	28	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/metrics.py	179	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/mobility.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/settings.py	61	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/units.py	21	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/common/__init__.py	0	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/cards.py	106	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/card_description.py	65	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/emission_nav.py	89	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/graphs.py	330	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/params.py	298	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/results.py	374	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/stickybar.py	297	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/components/__init__.py	0	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/cythonsim/build.py	2	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/cythonsim/__init__.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/data_import/fi_cases.py	64	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/data_import/google_covid_mobility.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/data_import/hs.py	111	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/data_import/thl.py	230	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/data_import/turku.py	60	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/utils/colors.py	87	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/utils/data.py	57	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/utils/perf.py	43	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/utils/quilt.py	65	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
reina-model/utils/__init__.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	2	Open Gromet Report	Open Preprocessed Gromet

Cornell-COVID19-sim-Frazier

Total Supported Lines: 8025/8725 (91.97707736389685%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
group-testing-v1/src/base_population.py	162	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/base_test_protocol.py	92	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/dyadic.py	64	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/dynamic_protocol_design.py	124	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/eval_r.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/extract_US_timeseries.py	46	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/frequency.py	21	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/group_testing.py	353	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/individual_interaction_population.py	215	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/legacy_simulation.py	91	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/main.py	29	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/old_gollier_simulation.py	84	✓	Open Parse Tree	Open CAST	Open Gromet	8	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/population.py	278	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/sample_collection.py	32	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulation.py	87	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulation_helpers.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/static_simulation.py	131	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/static_simulation_helpers.py	121	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/three_stage_hierarchical.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	8	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/two_stage_hierarchical.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/agent_based_sim/agent.py	166	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/agent_based_sim/multi_agent_sim.py	185	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/agent_based_sim/surveillance_testing.py	216	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/adaptive_testing.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/agent.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/contact_tracing.py	98	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/infection_dynamics.py	150	✓	Open Parse Tree	Open CAST	Open Gromet	9	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/multi_agent_sim.py	101	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/quarantine_manager.py	28	✓	Open Parse Tree	Open CAST	Open Gromet	8	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/social_network.py	81	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/multi_agent_sim/surveillance_testing.py	38	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/analysis_helpers.py	190	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/dynamic_population_sim.py	167	✓	Open Parse Tree	Open CAST	Open Gromet	26	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/dynamic_population_sim_outside_infection.py	175	✓	Open Parse Tree	Open CAST	Open Gromet	27	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/launch_fall_2021_prior_sims.py	171	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/load_params.py	245	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/multiparam_output_loader.py	74	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/multi_group_dorm_simulation.py	199	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/multi_group_simulation.py	214	✓	Open Parse Tree	Open CAST	Open Gromet	24	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/multi_group_simulation_dynamic_population.py	98	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/multi_group_simulation_lockdown.py	203	✓	Open Parse Tree	Open CAST	Open Gromet	24	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/plotting_util.py	397	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/run_sensitivity.py	229	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/single_dorm_discrete_test_schedule.py	166	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/single_dorm_simulation.py	149	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/single_dorm_staggered_test.py	84	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/stochastic_simulation.py	704	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/stochastic_simulation_lockdown.py	705	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/subdivide_severity.py	47	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/vax_sim_utils.py	142	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/deprecated/params.py	155	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/deprecated/run_nominal_sims.py	81	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/deprecated/run_sims.py	171	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/deprecated/sir_stochastic_sim.py	246	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/params/apr7calibration/set_calibration_params.py	112	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/params/jan4calibration/set_calibration_params.py	135	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/params/spring_2021_calibration/set_calibration_params.py	120	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
group-testing-v1/src/simulations_v2/params/spring_2021_calibration/spring_calibration_utils.py	152	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

ABM-Covasim

Total Supported Lines: 18792/31042 (60.537336511822694%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
covasim/setup.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/analysis.py	2343	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/base.py	1877	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/defaults.py	445	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/immunity.py	508	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/interventions.py	2198	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/misc.py	938	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/parameters.py	610	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/people.py	773	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/plotting.py	952	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/population.py	434	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/requirements.py	48	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/run.py	1544	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/settings.py	626	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/sim.py	1557	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/utils.py	669	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/version.py	9	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/__init__.py	32	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/data/country_age_data.py	1828	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/data/household_size_data.py	186	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/data/loaders.py	192	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/data/state_age_data.py	942	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/covasim/data/__init__.py	1	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/data/cova_epi_scraper.py	147	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/data/load_corona_data_scraper_data.py	49	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/data/load_covid_tracking_project_data.py	106	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/data/load_ecdp_data.py	31	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/data/load_household_data.py	40	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/docs/conf.py	237	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/run_scenarios.py	59	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/run_sim.py	31	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/simple.py	8	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t01_full_usage_example.py	27	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t01_hello_world.py	20	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t02_save_load_sim.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t03_nested_multisim.py	22	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t03_protect_elderly.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t03_scenarios.py	35	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t04_loading_data.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t04_populations.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_change_beta.py	24	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_change_beta_sinusoid.py	25	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_contact_tracing.py	22	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_custom_intervention.py	72	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_dynamic_pars.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_dynamic_triggering.py	42	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_testing.py	25	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t05_vaccine_subtargeting.py	28	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t06_seir_analyzer.py	45	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t06_simple_analyzers.py	32	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t07_custom_calibration.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t07_optuna_calibration.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t08_boosters.py	67	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t08_vaccinate_num.py	39	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t08_vaccinate_prob.py	19	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t08_variants.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t08_waning_immunity.py	22	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t09_dask.py	35	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t10_versioning.py	21	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t11_custom_layers.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t11_dynamic_layers.py	49	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t11_numba.py	28	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/t11_population_properties.py	32	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/test_examples.py	47	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/test_tutorials.py	51	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/calibration/sweep.py	46	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/cruise_ship/cruise_ship.py	7	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/cruise_ship/model.py	428	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/cruise_ship/parameters.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/cruise_ship/test_cruise_ship.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/examples/cruise_ship/test_cruise_sim.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/benchmark_profile.py	31	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_analysis.py	223	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_baselines.py	203	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_immunity.py	427	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_interventions.py	182	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_other.py	461	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_parameters.py	71	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_regression.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_resume.py	170	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_run.py	274	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_sim.py	153	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/test_utils.py	250	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/baseline_sim.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/benchmark_detailed.py	52	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/benchmark_parallel.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/compare_pop_types.py	25	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/compare_precision.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/contact_tracing_updates.py	54	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_age_distributions.py	50	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_basic_test_prob.py	26	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_blank.py	6	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_boosters.py	138	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_check_AZ_delta.py	53	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_counts.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_date_setting.py	20	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_dose_data.py	60	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_memory.py	10	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_no_age_prog.py	16	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_popchoices.py	56	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_prior_immunity.py	263	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_sample.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_shrink_vaccinate.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_transtree.py	171	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/dev_test_vaccine_efficiency.py	97	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/draw_networks.py	58	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/fitting_tests.py	39	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/ili_testing.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/intervention_export.py	19	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/layer_key_tests.py	88	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/multisim_combine_comparison.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/multisim_compare.py	26	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/multisim_merge_split.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/multisim_plotting_tests.py	45	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/networkx_example.py	31	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/one_line.py	18	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/population_load_save.py	58	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/population_seeds.py	44	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/prevalence_incidence.py	22	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/restore_parameters.py	32	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/serial_multisim.py	19	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/show_colors.py	36	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/simple_debug.py	14	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/simple_testing_interventions.py	42	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/sim_print_tests.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/snapshot_tests.py	13	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/synthpops_options.py	37	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_all.py	17	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_analyzer_to_json.py	35	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_country_households.py	52	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_daily_stats.py	25	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_get_interventions.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_gof.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_interventions.py	483	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_intervention_regression.py	66	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_msim_plotting.py	21	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_numba_parallelization.py	27	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_plot_people.py	18	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_testnum_scaling.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_vaccine.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/test_variants.py	451	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/tracing.py	34	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/ttq_interventions.py	58	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/age_example.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/age_histogram_tests.py	25	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/age_targeting.py	63	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/check_r_eff.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/choose_tests.py	46	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/choose_tests2.py	82	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/clip_edges.py	29	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/default_multisim.py	11	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_compute_gen_time.py	50	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_layers.py	73	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_people.py	50	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_plotly.py	37	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_popchoices2.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_populations.py	49	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_rescaling.py	119	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_r_eff.py	51	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dev_test_synthpops.py	148	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/dict_tests.py	70	✓	Open Parse Tree	Open CAST	Open Gromet	1	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/figure_saving.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/intervention_by_date.py	33	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/memory_test.py	42	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/memory_test2.py	44	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/multisim_plotting.py	28	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/multisim_tests.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/numba_tests.py	108	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/plotly_tests.py	16	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/pop_sizes.py	69	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/pop_type_scaling.py	42	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/run_viral_load.py	86	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/testing_delay.py	13	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/testing_test.py	34	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/testing_test2.py	38	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_basic_contact_tracing.py	60	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_beta_dist.py	87	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_num_swab_delay.py	444	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_prob_swab_delay.py	375	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_run_until.py	15	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/test_viral_dist.py	78	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/transtree_animation.py	188	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/transtree_plotting.py	61	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/devtests/archive/with_alf.py	114	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_data_loaders.py	23	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_misc.py	66	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_mortality.py	68	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_pars.py	144	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_pops.py	31	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_progression.py	112	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/test_transmission.py	40	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
covasim/tests/unittests/unittest_support.py	360	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet

TIE-GCM

Total Supported Lines: 14679/209076 (7.020891924467658%)

Can ingest system into single GrometFNModuleCollection: False

Open Full System Gromet

File Name	Num Lines	Can Produce Gromet	Tree-Sitter Parse Tree	CAST	Gromet	Gromet Errors	Gromet Report	Preprocessed Gromet
doc/release/conf.py	233	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
doc/userguide/conf.py	236	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/addfld.F	528	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/addiag.F	282	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/advance.F	903	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/advec.F	188	✓	Open Parse Tree	Open CAST	Open Gromet	788	Open Gromet Report	Open Preprocessed Gromet
src/allocdata.F	109	✓	Open Parse Tree	Open CAST	Open Gromet	12	Open Gromet Report	Open Preprocessed Gromet
src/amie.F	1304	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/amieoutput.F	182	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/aurora.F	1260	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/bgrd_data.F	545	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/chapman.F	249	✓	Open Parse Tree	Open CAST	Open Gromet	1228	Open Gromet Report	Open Preprocessed Gromet
src/chemrates.F	299	✓	Open Parse Tree	Open CAST	Open Gromet	1288	Open Gromet Report	Open Preprocessed Gromet
src/cism_adhoc.F	225	✓	Open Parse Tree	Open CAST	Open Gromet	8	Open Gromet Report	Open Preprocessed Gromet
src/cism_coupling.F	542	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/cism_intercomm.F	157	✓	Open Parse Tree	Open CAST	Open Gromet	8	Open Gromet Report	Open Preprocessed Gromet
src/colath.F	74	✓	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/comp.F	1163	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/comp_ar.F	159	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/comp_n2d.F	82	✓	Open Parse Tree	Open CAST	Open Gromet	292	Open Gromet Report	Open Preprocessed Gromet
src/comp_n4s.F	219	✓	Open Parse Tree	Open CAST	Open Gromet	628	Open Gromet Report	Open Preprocessed Gromet
src/comp_no.F	182	✓	Open Parse Tree	Open CAST	Open Gromet	400	Open Gromet Report	Open Preprocessed Gromet
src/comp_o2o.F	189	✓	Open Parse Tree	Open CAST	Open Gromet	1108	Open Gromet Report	Open Preprocessed Gromet
src/cons.F	559	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/cpktkm.F	118	✓	Open Parse Tree	Open CAST	Open Gromet	944	Open Gromet Report	Open Preprocessed Gromet
src/ctmt.F	526	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/defs.h	57	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/diags.F	1464	✓	Open Parse Tree	Open CAST	Open Gromet	2234	Open Gromet Report	Open Preprocessed Gromet
src/dispose.F	196	✓	Open Parse Tree	Open CAST	Open Gromet	72	Open Gromet Report	Open Preprocessed Gromet
src/divrg.F	89	✓	Open Parse Tree	Open CAST	Open Gromet	288	Open Gromet Report	Open Preprocessed Gromet
src/dt.F	487	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/duv.F	1017	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/dynamics.F	932	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/dyndiag.F	396	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/elden.F	335	✓	Open Parse Tree	Open CAST	Open Gromet	2360	Open Gromet Report	Open Preprocessed Gromet
src/esmf.F	1099	✓	Open Parse Tree	Open CAST	Open Gromet	1344	Open Gromet Report	Open Preprocessed Gromet
src/fft9.F	1148	✓	Open Parse Tree	Open CAST	Open Gromet	624	Open Gromet Report	Open Preprocessed Gromet
src/fields.F	1028	✓	Open Parse Tree	Open CAST	Open Gromet	1416	Open Gromet Report	Open Preprocessed Gromet
src/filter.F	178	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/getapex.F	370	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/getfile.F	51	✓	Open Parse Tree	Open CAST	Open Gromet	12	Open Gromet Report	Open Preprocessed Gromet
src/gpi.F	870	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/gswm.F	739	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/hdif.F	697	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/heelis.F	242	✓	Open Parse Tree	Open CAST	Open Gromet	608	Open Gromet Report	Open Preprocessed Gromet
src/he_coef0_dres.F	64822	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/he_coef1_dres.F	64823	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/he_coefs_sres.F	16873	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/hist.F	589	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/imf.F	365	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/init.F	309	✓	Open Parse Tree	Open CAST	Open Gromet	188	Open Gromet Report	Open Preprocessed Gromet
src/input.F	2242	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/input_read.F	40	✓	Open Parse Tree	Open CAST	Open Gromet	12	Open Gromet Report	Open Preprocessed Gromet
src/ionvel.F	176	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/lamdas.F	436	✓	Open Parse Tree	Open CAST	Open Gromet	2164	Open Gromet Report	Open Preprocessed Gromet
src/laplacian.F	201	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/lbc.F	693	✓	Open Parse Tree	Open CAST	Open Gromet	4184	Open Gromet Report	Open Preprocessed Gromet
src/lsqdsq.F	61	✓	Open Parse Tree	Open CAST	Open Gromet	172	Open Gromet Report	Open Preprocessed Gromet
src/magfield.F	286	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/magpres_g.F	385	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/minor.F	636	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/mkhvols.F	296	✓	Open Parse Tree	Open CAST	Open Gromet	392	Open Gromet Report	Open Preprocessed Gromet
src/mk_polelat.F	57	✓	Open Parse Tree	Open CAST	Open Gromet	174	Open Gromet Report	Open Preprocessed Gromet
src/mpi.F	5262	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/mud.F	1469	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/mudcom.F	2206	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/mudmod.F	840	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/muh2cr.F	2044	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/nchist.F	3613	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/newton.F	228	✓	Open Parse Tree	Open CAST	Open Gromet	1164	Open Gromet Report	Open Preprocessed Gromet
src/numfiles.F	154	✓	Open Parse Tree	Open CAST	Open Gromet	140	Open Gromet Report	Open Preprocessed Gromet
src/oplus.F	1268	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/output.F	550	✓	Open Parse Tree	Open CAST	Open Gromet	320	Open Gromet Report	Open Preprocessed Gromet
src/params.F	87	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/pdynamo.F	3980	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/qinite.F	164	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/qjion.F	159	✓	Open Parse Tree	Open CAST	Open Gromet	1160	Open Gromet Report	Open Preprocessed Gromet
src/qjnno.F	71	✓	Open Parse Tree	Open CAST	Open Gromet	404	Open Gromet Report	Open Preprocessed Gromet
src/qjoule.F	204	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/qrj.F	937	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/rdsource.F	255	✓	Open Parse Tree	Open CAST	Open Gromet	352	Open Gromet Report	Open Preprocessed Gromet
src/rgrd1.F	342	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/rgrd2.F	579	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/rgrd3.F	717	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/saber_tidi.F	640	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/settei.F	668	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/smooth.F	68	✓	Open Parse Tree	Open CAST	Open Gromet	364	Open Gromet Report	Open Preprocessed Gromet
src/soldata.F	326	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/sphpac.F	690	✓	Open Parse Tree	Open CAST	Open Gromet	636	Open Gromet Report	Open Preprocessed Gromet
src/swdot.F	162	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/tgcm.F	253	✓	Open Parse Tree	Open CAST	Open Gromet	56	Open Gromet Report	Open Preprocessed Gromet
src/timing.F	405	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/timing_mpi.F	139	✓	Open Parse Tree	Open CAST	Open Gromet	156	Open Gromet Report	Open Preprocessed Gromet
src/trsolv.F	107	✓	Open Parse Tree	Open CAST	Open Gromet	660	Open Gromet Report	Open Preprocessed Gromet
src/util.F	1478	✓	Open Parse Tree	Open CAST	Open Gromet	36	Open Gromet Report	Open Preprocessed Gromet
src/vtsetup.F	179	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet
src/wei05sc.F	1594	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
src/wrhist.F	178	✓	Open Parse Tree	Open CAST	Open Gromet	528	Open Gromet Report	Open Preprocessed Gromet
tgcmrun/classes.py	1310	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
tgcmrun/getoptions.py	486	✗	Open Parse Tree	Open CAST	Open Gromet	0	Open Gromet Report	Open Preprocessed Gromet
tgcmrun/utils.py	66	✓	Open Parse Tree	Open CAST	Open Gromet	4	Open Gromet Report	Open Preprocessed Gromet

Note: AMR in this report is generated without the assistance of an LLM. Results may be less accurate.

CHIME-penn-full

File Name	Can Produce AMR	AMR
penn_chime/cli.py	✗	Open AMR
penn_chime/constants.py	✗	Open AMR
penn_chime/__init__.py	✗	Open AMR
penn_chime/model/parameters.py	✗	Open AMR
penn_chime/model/sir.py	✗	Open AMR
penn_chime/model/__init__.py	✗	Open AMR
penn_chime/model/validators/base.py	✓	Open AMR
penn_chime/model/validators/validators.py	✗	Open AMR
penn_chime/model/validators/__init__.py	✗	Open AMR

CHIME-SIR

File Name	Can Produce AMR	AMR
CHIME_SIR-old.py	✓	Open AMR
CHIME_SIR.py	✓	Open AMR
CHIME_SIR_core.py	✓	Open AMR
CHIME_SIR_while_loop.py	✓	Open AMR

CHIME-SVIIvR

File Name	Can Produce AMR	AMR
CHIME_SVIIvR.py	✗	Open AMR
CHIME_SVIIvR_core.py	✗	Open AMR
CHIME_SVIIvR_dynamics.py	✗	Open AMR
CHIME_SVIIvR_while_loop.py	✓	Open AMR

ABM-COmplexVID-19

File Name	Can Produce AMR	AMR
COmplexVID-19/comunities.py	✗	Open AMR
COmplexVID-19/dynamics_OTM.py	✗	Open AMR
COmplexVID-19/model.py	✗	Open AMR
COmplexVID-19/run.py	✗	Open AMR

ABM-COVID-ABS

File Name	Can Produce AMR	AMR
COVID19_AgentBasedSimulation/run_batch.py	✗	Open AMR
COVID19_AgentBasedSimulation/setup.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/abs.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/agents.py	✓	Open AMR
COVID19_AgentBasedSimulation/covid_abs/common.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/experiments.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/graphics.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/util.py	✓	Open AMR
COVID19_AgentBasedSimulation/covid_abs/__init__.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/network/agents.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/network/graph_abs.py	✗	Open AMR
COVID19_AgentBasedSimulation/covid_abs/network/util.py	✓	Open AMR
COVID19_AgentBasedSimulation/covid_abs/network/__init__.py	✗	Open AMR

MechBayes

File Name	Can Produce AMR	AMR

SIDARTHE

File Name	Can Produce AMR	AMR
commented_Evaluation_Scenario_2.1.a.ii-Code_Version_A.py	✗	Open AMR
Evaluation_Scenario_2.1.a.ii-Code_Version_A.py	✗	Open AMR

Simple-SIR

File Name	Can Produce AMR	AMR
Simple_SIR.py	✓	Open AMR

Climlab-v1

File Name	Can Produce AMR	AMR
climlab-v1/domain/axis.py	✗	Open AMR
climlab-v1/domain/domain.py	✗	Open AMR
climlab-v1/domain/field.py	✗	Open AMR
climlab-v1/domain/initial.py	✗	Open AMR
climlab-v1/domain/xarray.py	✗	Open AMR
climlab-v1/domain/__init__.py	✗	Open AMR
climlab-v1/process/diagnostic.py	✓	Open AMR
climlab-v1/process/energy_budget.py	✓	Open AMR
climlab-v1/process/external_forcing.py	✓	Open AMR
climlab-v1/process/implicit.py	✓	Open AMR
climlab-v1/process/process.py	✗	Open AMR
climlab-v1/process/time_dependent_process.py	✗	Open AMR
climlab-v1/process/__init__.py	✗	Open AMR
climlab-v1/utils/constants.py	✓	Open AMR
climlab-v1/utils/heat_capacity.py	✓	Open AMR
climlab-v1/utils/legendre.py	✓	Open AMR
climlab-v1/utils/thermo.py	✗	Open AMR
climlab-v1/utils/walk.py	✗	Open AMR
climlab-v1/utils/__init__.py	✓	Open AMR
climlab-v1/utils/attrdict/default.py	✗	Open AMR
climlab-v1/utils/attrdict/dictionary.py	✗	Open AMR
climlab-v1/utils/attrdict/mapping.py	✗	Open AMR
climlab-v1/utils/attrdict/merge.py	✗	Open AMR
climlab-v1/utils/attrdict/mixins.py	✗	Open AMR
climlab-v1/utils/attrdict/__init__.py	✗	Open AMR

Climlab-v2

File Name	Can Produce AMR	AMR
climlab-v2/__init__.py	✓	Open AMR
climlab-v2/convection/	✗	Open AMR
climlab-v2/convection/__init__.py	✗	Open AMR
climlab-v2/convection/akmaev_adjustment.py	✗	Open AMR
climlab-v2/convection/convadj.py	✗	Open AMR
climlab-v2/convection/emanuel_convection.py	✗	Open AMR
climlab-v2/domain/	✗	Open AMR
climlab-v2/domain/__init__.py	✗	Open AMR
climlab-v2/domain/axis.py	✗	Open AMR
climlab-v2/domain/domain.py	✗	Open AMR
climlab-v2/domain/field.py	✗	Open AMR
climlab-v2/domain/initial.py	✗	Open AMR
climlab-v2/domain/xarray.py	✗	Open AMR
climlab-v2/dynamics/	✗	Open AMR
climlab-v2/dynamics/__init__.py	✗	Open AMR
climlab-v2/dynamics/adv_diff_numerics.py	✗	Open AMR
climlab-v2/dynamics/advection_diffusion.py	✗	Open AMR
climlab-v2/dynamics/budyko_transport.py	✗	Open AMR
climlab-v2/dynamics/meridional_advection_diffusion.py	✓	Open AMR
climlab-v2/dynamics/meridional_heat_diffusion.py	✗	Open AMR
climlab-v2/dynamics/meridional_moist_diffusion.py	✓	Open AMR
climlab-v2/model/	✗	Open AMR
climlab-v2/model/__init__.py	✗	Open AMR
climlab-v2/model/column.py	✗	Open AMR
climlab-v2/model/ebm.py	✗	Open AMR
climlab-v2/model/stommelbox.py	✗	Open AMR
climlab-v2/process/	✗	Open AMR
climlab-v2/process/__init__.py	✗	Open AMR
climlab-v2/process/diagnostic.py	✓	Open AMR
climlab-v2/process/energy_budget.py	✓	Open AMR
climlab-v2/process/external_forcing.py	✓	Open AMR
climlab-v2/process/implicit.py	✓	Open AMR
climlab-v2/process/process.py	✗	Open AMR
climlab-v2/process/time_dependent_process.py	✗	Open AMR
climlab-v2/radiation/	✗	Open AMR
climlab-v2/radiation/__init__.py	✗	Open AMR
climlab-v2/radiation/absorbed_shorwave.py	✓	Open AMR
climlab-v2/radiation/aplusbt.py	✗	Open AMR
climlab-v2/radiation/boltzmann.py	✗	Open AMR
climlab-v2/radiation/cam3.py	✗	Open AMR
climlab-v2/radiation/greygas.py	✗	Open AMR
climlab-v2/radiation/insolation.py	✗	Open AMR
climlab-v2/radiation/nband.py	✗	Open AMR
climlab-v2/radiation/radiation.py	✗	Open AMR
climlab-v2/radiation/rrtm/	✗	Open AMR
climlab-v2/radiation/rrtm/__init__.py	✗	Open AMR
climlab-v2/radiation/rrtm/rrtmg.py	✓	Open AMR
climlab-v2/radiation/rrtm/rrtmg_lw.py	✗	Open AMR
climlab-v2/radiation/rrtm/rrtmg_sw.py	✗	Open AMR
climlab-v2/radiation/rrtm/setup.py	✓	Open AMR
climlab-v2/radiation/rrtm/utils.py	✗	Open AMR
climlab-v2/radiation/transmissivity.py	✗	Open AMR
climlab-v2/radiation/water_vapor.py	✓	Open AMR
climlab-v2/solar/	✗	Open AMR
climlab-v2/solar/__init__.py	✗	Open AMR
climlab-v2/solar/insolation.py	✗	Open AMR
climlab-v2/solar/orbital/	✗	Open AMR
climlab-v2/solar/orbital/__init__.py	✗	Open AMR
climlab-v2/solar/orbital/long.py	✗	Open AMR
climlab-v2/solar/orbital/setup.py	✗	Open AMR
climlab-v2/solar/orbital/table.py	✗	Open AMR
climlab-v2/solar/orbital_cycles.py	✓	Open AMR
climlab-v2/surface/	✗	Open AMR
climlab-v2/surface/__init__.py	✗	Open AMR
climlab-v2/surface/albedo.py	✗	Open AMR
climlab-v2/surface/surface_radiation.py	✓	Open AMR
climlab-v2/surface/turbulent.py	✗	Open AMR
climlab-v2/tests/	✗	Open AMR
climlab-v2/tests/__init__.py	✗	Open AMR
climlab-v2/tests/test_advdiff_solver.py	✗	Open AMR
climlab-v2/tests/test_bandrc.py	✗	Open AMR
climlab-v2/tests/test_cam3rad.py	✗	Open AMR
climlab-v2/tests/test_domain2D.py	✗	Open AMR
climlab-v2/tests/test_ebm.py	✗	Open AMR
climlab-v2/tests/test_emanuel_convection.py	✗	Open AMR
climlab-v2/tests/test_grey_radiation.py	✗	Open AMR
climlab-v2/tests/test_insolation.py	✗	Open AMR
climlab-v2/tests/test_rcm.py	✗	Open AMR
climlab-v2/tests/test_rrtm.py	✗	Open AMR
climlab-v2/tests/test_thermo.py	✗	Open AMR
climlab-v2/tests/xarray_test.py	✗	Open AMR
climlab-v2/utils/	✗	Open AMR
climlab-v2/utils/__init__.py	✓	Open AMR
climlab-v2/utils/attrdict/	✗	Open AMR
climlab-v2/utils/attrdict/__init__.py	✗	Open AMR
climlab-v2/utils/attrdict/default.py	✗	Open AMR
climlab-v2/utils/attrdict/dictionary.py	✗	Open AMR
climlab-v2/utils/attrdict/mapping.py	✗	Open AMR
climlab-v2/utils/attrdict/merge.py	✗	Open AMR
climlab-v2/utils/attrdict/mixins.py	✗	Open AMR
climlab-v2/utils/constants.py	✓	Open AMR
climlab-v2/utils/heat_capacity.py	✓	Open AMR
climlab-v2/utils/legendre.py	✓	Open AMR
climlab-v2/utils/thermo.py	✗	Open AMR
climlab-v2/utils/walk.py	✗	Open AMR

Examples-Python

File Name	Can Produce AMR	AMR
assign_keyword1/assign_keyword1.py	✓	Open AMR
assign_operator1/assign_operator1.py	✓	Open AMR
class1/class1.py	✓	Open AMR
class2/class2.py	✓	Open AMR
class3/class3.py	✗	Open AMR
cond1/cond1.py	✓	Open AMR
cond2/cond2.py	✓	Open AMR
cond_compound1/cond_compound1.py	✓	Open AMR
cond_compound2/cond_compound2.py	✓	Open AMR
cond_compound3/cond_compound3.py	✓	Open AMR
dict1/dict1.py	✓	Open AMR
dso_kmeans/sklearn_clustering_kmeans.py	✗	Open AMR
ellipsis1/ellipsis1.py	✓	Open AMR
exp0/exp0.py	✓	Open AMR
exp1/exp1.py	✓	Open AMR
exp2/exp2.py	✓	Open AMR
exp3/exp3.py	✓	Open AMR
for1/for1.py	✓	Open AMR
for2/for2.py	✓	Open AMR
fun1/fun1.py	✓	Open AMR
fun2/fun2.py	✓	Open AMR
fun3/fun3.py	✓	Open AMR
fun4/fun4.py	✓	Open AMR
fun_default1/fun_default1.py	✓	Open AMR
fun_first_class_arg/fun_first_class_arg.py	✗	Open AMR
fun_nested_def/fun_nested_def.py	✗	Open AMR
import1/import1.py	✗	Open AMR
import2/import2.py	✗	Open AMR
import3/import3.py	✗	Open AMR
import4/import4.py	✗	Open AMR
recurse1/recurse1.py	✓	Open AMR
recurse2/recurse2.py	✓	Open AMR
slice1/slice1.py	✗	Open AMR
unpack1/unpack1.py	✓	Open AMR
while1/while1.py	✓	Open AMR
while2/while2.py	✓	Open AMR
while3/while3.py	✓	Open AMR

Generated-Halfar

File Name	Can Produce AMR	AMR
halfar_1d_v1.py	✓	Open AMR
halfar_3d_v1.py	✗	Open AMR
halfar_dome_1d_v1.py	✗	Open AMR

SV2AIR3-Waterloo-MATLAB

File Name	Can Produce AMR	AMR
SARS-CoV-2-variants-of-concern-in-Ontario/get_beta.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/get_vaccine_rate.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/plot_data.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/shade.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/svair.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/svir.m	✗	Open AMR
SARS-CoV-2-variants-of-concern-in-Ontario/voc2_driver.m	✗	Open AMR

Bucky

File Name	Can Produce AMR	AMR
config.py	✗	Open AMR
exceptions.py	✓	Open AMR
numerical_libs.py	✗	Open AMR
postprocess.py	✗	Open AMR
_typing.py	✓	Open AMR
__init__.py	✓	Open AMR
__main__.py	✓	Open AMR
cli/cfg.py	✓	Open AMR
cli/data.py	✓	Open AMR
cli/main.py	✗	Open AMR
cli/run.py	✗	Open AMR
cli/typer_utils.py	✓	Open AMR
cli/viz.py	✗	Open AMR
cli/__init__.py	✗	Open AMR
cli/__main__.py	✓	Open AMR
data/adm_mapping.py	✗	Open AMR
data/clean_historical_data.py	✗	Open AMR
data/timeseries.py	✗	Open AMR
data/__init__.py	✗	Open AMR
datasource_transforms/bin_bridged_race_census_csv.py	✗	Open AMR
datasource_transforms/csse_timeseries.py	✗	Open AMR
datasource_transforms/extract_shapefile_data.py	✗	Open AMR
datasource_transforms/hhs_hosp_cleanup.py	✗	Open AMR
datasource_transforms/prem_2020_csv.py	✗	Open AMR
datasource_transforms/__init__.py	✗	Open AMR
model/adjmat.py	✗	Open AMR
model/data.py	✗	Open AMR
model/derived_epi_params.py	✓	Open AMR
model/estimation.py	✗	Open AMR
model/exceptions.py	✓	Open AMR
model/io.py	✗	Open AMR
model/main.py	✗	Open AMR
model/mc_instance.py	✗	Open AMR
model/npi.py	✗	Open AMR
model/rhs.py	✗	Open AMR
model/state.py	✗	Open AMR
model/vacc.py	✗	Open AMR
model/__init__.py	✗	Open AMR
util/age_interp.py	✗	Open AMR
util/array_utils.py	✗	Open AMR
util/async_thread.py	✗	Open AMR
util/cached_prop.py	✓	Open AMR
util/data_sync.py	✗	Open AMR
util/detect_cupy.py	✓	Open AMR
util/distributions.py	✗	Open AMR
util/extrapolate.py	✓	Open AMR
util/fractional_slice.py	✗	Open AMR
util/import_by_name.py	✓	Open AMR
util/loess.py	✗	Open AMR
util/nested_dict.py	✗	Open AMR
util/ode_constraints.py	✗	Open AMR
util/power_transforms.py	✗	Open AMR
util/scoring.py	✗	Open AMR
util/spline_smooth.py	✗	Open AMR
util/util.py	✗	Open AMR
util/working_directory.py	✓	Open AMR
util/__init__.py	✗	Open AMR
viz/plot.py	✗	Open AMR
viz/readable_col_names.py	✓	Open AMR
viz/utils.py	✗	Open AMR
viz/__init__.py	✗	Open AMR

ABM-REINA

File Name	Can Produce AMR	AMR
reina-model/corona.py	✗	Open AMR
reina-model/graphql_backend.py	✗	Open AMR
reina-model/graphql_schema.py	✗	Open AMR
reina-model/scenarios.py	✗	Open AMR
reina-model/simulation_thread.py	✗	Open AMR
reina-model/test_graphql.py	✗	Open AMR
reina-model/variables.py	✗	Open AMR
reina-model/calc/datasets.py	✗	Open AMR
reina-model/calc/simulation.py	✗	Open AMR
reina-model/calc/simulation_numba.py	✗	Open AMR
reina-model/calc/sir.py	✗	Open AMR
reina-model/calc/utils.py	✗	Open AMR
reina-model/calc/__init__.py	✗	Open AMR
reina-model/common/cache.py	✗	Open AMR
reina-model/common/exceptions.py	✓	Open AMR
reina-model/common/interventions.py	✗	Open AMR
reina-model/common/locale.py	✗	Open AMR
reina-model/common/metrics.py	✗	Open AMR
reina-model/common/mobility.py	✓	Open AMR
reina-model/common/settings.py	✗	Open AMR
reina-model/common/units.py	✗	Open AMR
reina-model/common/__init__.py	✗	Open AMR
reina-model/components/cards.py	✗	Open AMR
reina-model/components/card_description.py	✗	Open AMR
reina-model/components/emission_nav.py	✗	Open AMR
reina-model/components/graphs.py	✗	Open AMR
reina-model/components/params.py	✗	Open AMR
reina-model/components/results.py	✗	Open AMR
reina-model/components/stickybar.py	✗	Open AMR
reina-model/components/__init__.py	✗	Open AMR
reina-model/cythonsim/build.py	✗	Open AMR
reina-model/cythonsim/__init__.py	✗	Open AMR
reina-model/data_import/fi_cases.py	✗	Open AMR
reina-model/data_import/google_covid_mobility.py	✓	Open AMR
reina-model/data_import/hs.py	✗	Open AMR
reina-model/data_import/thl.py	✗	Open AMR
reina-model/data_import/turku.py	✗	Open AMR
reina-model/utils/colors.py	✗	Open AMR
reina-model/utils/data.py	✗	Open AMR
reina-model/utils/perf.py	✗	Open AMR
reina-model/utils/quilt.py	✗	Open AMR
reina-model/utils/__init__.py	✗	Open AMR

Cornell-COVID19-sim-Frazier

File Name	Can Produce AMR	AMR
group-testing-v1/src/base_population.py	✗	Open AMR
group-testing-v1/src/base_test_protocol.py	✓	Open AMR
group-testing-v1/src/dyadic.py	✗	Open AMR
group-testing-v1/src/dynamic_protocol_design.py	✗	Open AMR
group-testing-v1/src/eval_r.py	✗	Open AMR
group-testing-v1/src/extract_US_timeseries.py	✗	Open AMR
group-testing-v1/src/frequency.py	✓	Open AMR
group-testing-v1/src/group_testing.py	✗	Open AMR
group-testing-v1/src/individual_interaction_population.py	✗	Open AMR
group-testing-v1/src/legacy_simulation.py	✗	Open AMR
group-testing-v1/src/main.py	✗	Open AMR
group-testing-v1/src/old_gollier_simulation.py	✗	Open AMR
group-testing-v1/src/population.py	✓	Open AMR
group-testing-v1/src/sample_collection.py	✓	Open AMR
group-testing-v1/src/simulation.py	✓	Open AMR
group-testing-v1/src/simulation_helpers.py	✗	Open AMR
group-testing-v1/src/static_simulation.py	✗	Open AMR
group-testing-v1/src/static_simulation_helpers.py	✗	Open AMR
group-testing-v1/src/three_stage_hierarchical.py	✗	Open AMR
group-testing-v1/src/two_stage_hierarchical.py	✗	Open AMR
group-testing-v1/src/agent_based_sim/agent.py	✓	Open AMR
group-testing-v1/src/agent_based_sim/multi_agent_sim.py	✗	Open AMR
group-testing-v1/src/agent_based_sim/surveillance_testing.py	✗	Open AMR
group-testing-v1/src/multi_agent_sim/adaptive_testing.py	✗	Open AMR
group-testing-v1/src/multi_agent_sim/agent.py	✓	Open AMR
group-testing-v1/src/multi_agent_sim/contact_tracing.py	✗	Open AMR
group-testing-v1/src/multi_agent_sim/infection_dynamics.py	✓	Open AMR
group-testing-v1/src/multi_agent_sim/multi_agent_sim.py	✗	Open AMR
group-testing-v1/src/multi_agent_sim/quarantine_manager.py	✓	Open AMR
group-testing-v1/src/multi_agent_sim/social_network.py	✗	Open AMR
group-testing-v1/src/multi_agent_sim/surveillance_testing.py	✗	Open AMR
group-testing-v1/src/simulations_v2/analysis_helpers.py	✗	Open AMR
group-testing-v1/src/simulations_v2/dynamic_population_sim.py	✗	Open AMR
group-testing-v1/src/simulations_v2/dynamic_population_sim_outside_infection.py	✗	Open AMR
group-testing-v1/src/simulations_v2/launch_fall_2021_prior_sims.py	✗	Open AMR
group-testing-v1/src/simulations_v2/load_params.py	✗	Open AMR
group-testing-v1/src/simulations_v2/multiparam_output_loader.py	✗	Open AMR
group-testing-v1/src/simulations_v2/multi_group_dorm_simulation.py	✗	Open AMR
group-testing-v1/src/simulations_v2/multi_group_simulation.py	✗	Open AMR
group-testing-v1/src/simulations_v2/multi_group_simulation_dynamic_population.py	✗	Open AMR
group-testing-v1/src/simulations_v2/multi_group_simulation_lockdown.py	✗	Open AMR
group-testing-v1/src/simulations_v2/plotting_util.py	✗	Open AMR
group-testing-v1/src/simulations_v2/run_sensitivity.py	✗	Open AMR
group-testing-v1/src/simulations_v2/single_dorm_discrete_test_schedule.py	✗	Open AMR
group-testing-v1/src/simulations_v2/single_dorm_simulation.py	✗	Open AMR
group-testing-v1/src/simulations_v2/single_dorm_staggered_test.py	✗	Open AMR
group-testing-v1/src/simulations_v2/stochastic_simulation.py	✗	Open AMR
group-testing-v1/src/simulations_v2/stochastic_simulation_lockdown.py	✗	Open AMR
group-testing-v1/src/simulations_v2/subdivide_severity.py	✗	Open AMR
group-testing-v1/src/simulations_v2/vax_sim_utils.py	✗	Open AMR
group-testing-v1/src/simulations_v2/deprecated/params.py	✗	Open AMR
group-testing-v1/src/simulations_v2/deprecated/run_nominal_sims.py	✗	Open AMR
group-testing-v1/src/simulations_v2/deprecated/run_sims.py	✗	Open AMR
group-testing-v1/src/simulations_v2/deprecated/sir_stochastic_sim.py	✗	Open AMR
group-testing-v1/src/simulations_v2/params/apr7calibration/set_calibration_params.py	✗	Open AMR
group-testing-v1/src/simulations_v2/params/jan4calibration/set_calibration_params.py	✗	Open AMR
group-testing-v1/src/simulations_v2/params/spring_2021_calibration/set_calibration_params.py	✗	Open AMR
group-testing-v1/src/simulations_v2/params/spring_2021_calibration/spring_calibration_utils.py	✗	Open AMR

ABM-Covasim

File Name	Can Produce AMR	AMR
covasim/setup.py	✗	Open AMR
covasim/covasim/analysis.py	✗	Open AMR
covasim/covasim/base.py	✗	Open AMR
covasim/covasim/defaults.py	✗	Open AMR
covasim/covasim/immunity.py	✗	Open AMR
covasim/covasim/interventions.py	✗	Open AMR
covasim/covasim/misc.py	✗	Open AMR
covasim/covasim/parameters.py	✗	Open AMR
covasim/covasim/people.py	✗	Open AMR
covasim/covasim/plotting.py	✗	Open AMR
covasim/covasim/population.py	✗	Open AMR
covasim/covasim/requirements.py	✗	Open AMR
covasim/covasim/run.py	✗	Open AMR
covasim/covasim/settings.py	✗	Open AMR
covasim/covasim/sim.py	✗	Open AMR
covasim/covasim/utils.py	✗	Open AMR
covasim/covasim/version.py	✗	Open AMR
covasim/covasim/__init__.py	✗	Open AMR
covasim/covasim/data/country_age_data.py	✓	Open AMR
covasim/covasim/data/household_size_data.py	✓	Open AMR
covasim/covasim/data/loaders.py	✗	Open AMR
covasim/covasim/data/state_age_data.py	✓	Open AMR
covasim/covasim/data/__init__.py	✗	Open AMR
covasim/data/cova_epi_scraper.py	✗	Open AMR
covasim/data/load_corona_data_scraper_data.py	✗	Open AMR
covasim/data/load_covid_tracking_project_data.py	✗	Open AMR
covasim/data/load_ecdp_data.py	✗	Open AMR
covasim/data/load_household_data.py	✗	Open AMR
covasim/docs/conf.py	✗	Open AMR
covasim/examples/run_scenarios.py	✗	Open AMR
covasim/examples/run_sim.py	✗	Open AMR
covasim/examples/simple.py	✓	Open AMR
covasim/examples/t01_full_usage_example.py	✗	Open AMR
covasim/examples/t01_hello_world.py	✗	Open AMR
covasim/examples/t02_save_load_sim.py	✗	Open AMR
covasim/examples/t03_nested_multisim.py	✗	Open AMR
covasim/examples/t03_protect_elderly.py	✗	Open AMR
covasim/examples/t03_scenarios.py	✗	Open AMR
covasim/examples/t04_loading_data.py	✗	Open AMR
covasim/examples/t04_populations.py	✗	Open AMR
covasim/examples/t05_change_beta.py	✗	Open AMR
covasim/examples/t05_change_beta_sinusoid.py	✗	Open AMR
covasim/examples/t05_contact_tracing.py	✗	Open AMR
covasim/examples/t05_custom_intervention.py	✗	Open AMR
covasim/examples/t05_dynamic_pars.py	✗	Open AMR
covasim/examples/t05_dynamic_triggering.py	✗	Open AMR
covasim/examples/t05_testing.py	✗	Open AMR
covasim/examples/t05_vaccine_subtargeting.py	✗	Open AMR
covasim/examples/t06_seir_analyzer.py	✗	Open AMR
covasim/examples/t06_simple_analyzers.py	✗	Open AMR
covasim/examples/t07_custom_calibration.py	✗	Open AMR
covasim/examples/t07_optuna_calibration.py	✗	Open AMR
covasim/examples/t08_boosters.py	✗	Open AMR
covasim/examples/t08_vaccinate_num.py	✗	Open AMR
covasim/examples/t08_vaccinate_prob.py	✗	Open AMR
covasim/examples/t08_variants.py	✗	Open AMR
covasim/examples/t08_waning_immunity.py	✗	Open AMR
covasim/examples/t09_dask.py	✗	Open AMR
covasim/examples/t10_versioning.py	✗	Open AMR
covasim/examples/t11_custom_layers.py	✗	Open AMR
covasim/examples/t11_dynamic_layers.py	✗	Open AMR
covasim/examples/t11_numba.py	✗	Open AMR
covasim/examples/t11_population_properties.py	✗	Open AMR
covasim/examples/test_examples.py	✗	Open AMR
covasim/examples/test_tutorials.py	✗	Open AMR
covasim/examples/calibration/sweep.py	✗	Open AMR
covasim/examples/cruise_ship/cruise_ship.py	✗	Open AMR
covasim/examples/cruise_ship/model.py	✗	Open AMR
covasim/examples/cruise_ship/parameters.py	✗	Open AMR
covasim/examples/cruise_ship/test_cruise_ship.py	✗	Open AMR
covasim/examples/cruise_ship/test_cruise_sim.py	✗	Open AMR
covasim/tests/benchmark_profile.py	✗	Open AMR
covasim/tests/test_analysis.py	✗	Open AMR
covasim/tests/test_baselines.py	✗	Open AMR
covasim/tests/test_immunity.py	✗	Open AMR
covasim/tests/test_interventions.py	✗	Open AMR
covasim/tests/test_other.py	✗	Open AMR
covasim/tests/test_parameters.py	✗	Open AMR
covasim/tests/test_regression.py	✗	Open AMR
covasim/tests/test_resume.py	✗	Open AMR
covasim/tests/test_run.py	✗	Open AMR
covasim/tests/test_sim.py	✗	Open AMR
covasim/tests/test_utils.py	✗	Open AMR
covasim/tests/devtests/baseline_sim.py	✗	Open AMR
covasim/tests/devtests/benchmark_detailed.py	✗	Open AMR
covasim/tests/devtests/benchmark_parallel.py	✗	Open AMR
covasim/tests/devtests/compare_pop_types.py	✗	Open AMR
covasim/tests/devtests/compare_precision.py	✗	Open AMR
covasim/tests/devtests/contact_tracing_updates.py	✗	Open AMR
covasim/tests/devtests/dev_test_age_distributions.py	✗	Open AMR
covasim/tests/devtests/dev_test_basic_test_prob.py	✗	Open AMR
covasim/tests/devtests/dev_test_blank.py	✓	Open AMR
covasim/tests/devtests/dev_test_boosters.py	✗	Open AMR
covasim/tests/devtests/dev_test_check_AZ_delta.py	✗	Open AMR
covasim/tests/devtests/dev_test_counts.py	✗	Open AMR
covasim/tests/devtests/dev_test_date_setting.py	✗	Open AMR
covasim/tests/devtests/dev_test_dose_data.py	✗	Open AMR
covasim/tests/devtests/dev_test_memory.py	✗	Open AMR
covasim/tests/devtests/dev_test_no_age_prog.py	✗	Open AMR
covasim/tests/devtests/dev_test_popchoices.py	✗	Open AMR
covasim/tests/devtests/dev_test_prior_immunity.py	✗	Open AMR
covasim/tests/devtests/dev_test_sample.py	✗	Open AMR
covasim/tests/devtests/dev_test_shrink_vaccinate.py	✗	Open AMR
covasim/tests/devtests/dev_test_transtree.py	✗	Open AMR
covasim/tests/devtests/dev_test_vaccine_efficiency.py	✗	Open AMR
covasim/tests/devtests/draw_networks.py	✗	Open AMR
covasim/tests/devtests/fitting_tests.py	✗	Open AMR
covasim/tests/devtests/ili_testing.py	✗	Open AMR
covasim/tests/devtests/intervention_export.py	✗	Open AMR
covasim/tests/devtests/layer_key_tests.py	✗	Open AMR
covasim/tests/devtests/multisim_combine_comparison.py	✗	Open AMR
covasim/tests/devtests/multisim_compare.py	✗	Open AMR
covasim/tests/devtests/multisim_merge_split.py	✗	Open AMR
covasim/tests/devtests/multisim_plotting_tests.py	✗	Open AMR
covasim/tests/devtests/networkx_example.py	✗	Open AMR
covasim/tests/devtests/one_line.py	✗	Open AMR
covasim/tests/devtests/population_load_save.py	✗	Open AMR
covasim/tests/devtests/population_seeds.py	✗	Open AMR
covasim/tests/devtests/prevalence_incidence.py	✗	Open AMR
covasim/tests/devtests/restore_parameters.py	✗	Open AMR
covasim/tests/devtests/serial_multisim.py	✗	Open AMR
covasim/tests/devtests/show_colors.py	✗	Open AMR
covasim/tests/devtests/simple_debug.py	✗	Open AMR
covasim/tests/devtests/simple_testing_interventions.py	✗	Open AMR
covasim/tests/devtests/sim_print_tests.py	✗	Open AMR
covasim/tests/devtests/snapshot_tests.py	✗	Open AMR
covasim/tests/devtests/synthpops_options.py	✗	Open AMR
covasim/tests/devtests/test_all.py	✗	Open AMR
covasim/tests/devtests/test_analyzer_to_json.py	✗	Open AMR
covasim/tests/devtests/test_country_households.py	✗	Open AMR
covasim/tests/devtests/test_daily_stats.py	✗	Open AMR
covasim/tests/devtests/test_get_interventions.py	✗	Open AMR
covasim/tests/devtests/test_gof.py	✗	Open AMR
covasim/tests/devtests/test_interventions.py	✗	Open AMR
covasim/tests/devtests/test_intervention_regression.py	✗	Open AMR
covasim/tests/devtests/test_msim_plotting.py	✗	Open AMR
covasim/tests/devtests/test_numba_parallelization.py	✗	Open AMR
covasim/tests/devtests/test_plot_people.py	✗	Open AMR
covasim/tests/devtests/test_testnum_scaling.py	✗	Open AMR
covasim/tests/devtests/test_vaccine.py	✗	Open AMR
covasim/tests/devtests/test_variants.py	✗	Open AMR
covasim/tests/devtests/tracing.py	✗	Open AMR
covasim/tests/devtests/ttq_interventions.py	✗	Open AMR
covasim/tests/devtests/archive/age_example.py	✗	Open AMR
covasim/tests/devtests/archive/age_histogram_tests.py	✗	Open AMR
covasim/tests/devtests/archive/age_targeting.py	✗	Open AMR
covasim/tests/devtests/archive/check_r_eff.py	✗	Open AMR
covasim/tests/devtests/archive/choose_tests.py	✗	Open AMR
covasim/tests/devtests/archive/choose_tests2.py	✗	Open AMR
covasim/tests/devtests/archive/clip_edges.py	✗	Open AMR
covasim/tests/devtests/archive/default_multisim.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_compute_gen_time.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_layers.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_people.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_plotly.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_popchoices2.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_populations.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_rescaling.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_r_eff.py	✗	Open AMR
covasim/tests/devtests/archive/dev_test_synthpops.py	✗	Open AMR
covasim/tests/devtests/archive/dict_tests.py	✗	Open AMR
covasim/tests/devtests/archive/figure_saving.py	✗	Open AMR
covasim/tests/devtests/archive/intervention_by_date.py	✗	Open AMR
covasim/tests/devtests/archive/memory_test.py	✗	Open AMR
covasim/tests/devtests/archive/memory_test2.py	✗	Open AMR
covasim/tests/devtests/archive/multisim_plotting.py	✗	Open AMR
covasim/tests/devtests/archive/multisim_tests.py	✗	Open AMR
covasim/tests/devtests/archive/numba_tests.py	✗	Open AMR
covasim/tests/devtests/archive/plotly_tests.py	✗	Open AMR
covasim/tests/devtests/archive/pop_sizes.py	✗	Open AMR
covasim/tests/devtests/archive/pop_type_scaling.py	✗	Open AMR
covasim/tests/devtests/archive/run_viral_load.py	✗	Open AMR
covasim/tests/devtests/archive/testing_delay.py	✗	Open AMR
covasim/tests/devtests/archive/testing_test.py	✗	Open AMR
covasim/tests/devtests/archive/testing_test2.py	✗	Open AMR
covasim/tests/devtests/archive/test_basic_contact_tracing.py	✗	Open AMR
covasim/tests/devtests/archive/test_beta_dist.py	✗	Open AMR
covasim/tests/devtests/archive/test_num_swab_delay.py	✗	Open AMR
covasim/tests/devtests/archive/test_prob_swab_delay.py	✗	Open AMR
covasim/tests/devtests/archive/test_run_until.py	✗	Open AMR
covasim/tests/devtests/archive/test_viral_dist.py	✗	Open AMR
covasim/tests/devtests/archive/transtree_animation.py	✗	Open AMR
covasim/tests/devtests/archive/transtree_plotting.py	✗	Open AMR
covasim/tests/devtests/archive/with_alf.py	✗	Open AMR
covasim/tests/unittests/test_data_loaders.py	✗	Open AMR
covasim/tests/unittests/test_misc.py	✗	Open AMR
covasim/tests/unittests/test_mortality.py	✗	Open AMR
covasim/tests/unittests/test_pars.py	✗	Open AMR
covasim/tests/unittests/test_pops.py	✗	Open AMR
covasim/tests/unittests/test_progression.py	✗	Open AMR
covasim/tests/unittests/test_transmission.py	✗	Open AMR
covasim/tests/unittests/unittest_support.py	✗	Open AMR

TIE-GCM

File Name	Can Produce AMR	AMR
doc/release/conf.py	✗	Open AMR
doc/userguide/conf.py	✗	Open AMR
src/addfld.F	✗	Open AMR
src/addiag.F	✗	Open AMR
src/advance.F	✗	Open AMR
src/advec.F	✗	Open AMR
src/allocdata.F	✓	Open AMR
src/amie.F	✗	Open AMR
src/amieoutput.F	✗	Open AMR
src/aurora.F	✗	Open AMR
src/bgrd_data.F	✗	Open AMR
src/chapman.F	✗	Open AMR
src/chemrates.F	✗	Open AMR
src/cism_adhoc.F	✓	Open AMR
src/cism_coupling.F	✗	Open AMR
src/cism_intercomm.F	✓	Open AMR
src/colath.F	✗	Open AMR
src/comp.F	✗	Open AMR
src/comp_ar.F	✗	Open AMR
src/comp_n2d.F	✗	Open AMR
src/comp_n4s.F	✗	Open AMR
src/comp_no.F	✗	Open AMR
src/comp_o2o.F	✗	Open AMR
src/cons.F	✗	Open AMR
src/cpktkm.F	✗	Open AMR
src/ctmt.F	✗	Open AMR
src/defs.h	✗	Open AMR
src/diags.F	✗	Open AMR
src/dispose.F	✗	Open AMR
src/divrg.F	✗	Open AMR
src/dt.F	✗	Open AMR
src/duv.F	✗	Open AMR
src/dynamics.F	✗	Open AMR
src/dyndiag.F	✗	Open AMR
src/elden.F	✗	Open AMR
src/esmf.F	✗	Open AMR
src/fft9.F	✗	Open AMR
src/fields.F	✗	Open AMR
src/filter.F	✗	Open AMR
src/getapex.F	✗	Open AMR
src/getfile.F	✗	Open AMR
src/gpi.F	✗	Open AMR
src/gswm.F	✗	Open AMR
src/hdif.F	✗	Open AMR
src/heelis.F	✗	Open AMR
src/he_coef0_dres.F	✗	Open AMR
src/he_coef1_dres.F	✗	Open AMR
src/he_coefs_sres.F	✗	Open AMR
src/hist.F	✗	Open AMR
src/imf.F	✗	Open AMR
src/init.F	✗	Open AMR
src/input.F	✗	Open AMR
src/input_read.F	✗	Open AMR
src/ionvel.F	✗	Open AMR
src/lamdas.F	✗	Open AMR
src/laplacian.F	✗	Open AMR
src/lbc.F	✗	Open AMR
src/lsqdsq.F	✗	Open AMR
src/magfield.F	✗	Open AMR
src/magpres_g.F	✗	Open AMR
src/minor.F	✗	Open AMR
src/mkhvols.F	✗	Open AMR
src/mk_polelat.F	✗	Open AMR
src/mpi.F	✗	Open AMR
src/mud.F	✗	Open AMR
src/mudcom.F	✗	Open AMR
src/mudmod.F	✗	Open AMR
src/muh2cr.F	✗	Open AMR
src/nchist.F	✗	Open AMR
src/newton.F	✗	Open AMR
src/numfiles.F	✗	Open AMR
src/oplus.F	✗	Open AMR
src/output.F	✗	Open AMR
src/params.F	✗	Open AMR
src/pdynamo.F	✗	Open AMR
src/qinite.F	✗	Open AMR
src/qjion.F	✗	Open AMR
src/qjnno.F	✗	Open AMR
src/qjoule.F	✗	Open AMR
src/qrj.F	✗	Open AMR
src/rdsource.F	✗	Open AMR
src/rgrd1.F	✗	Open AMR
src/rgrd2.F	✗	Open AMR
src/rgrd3.F	✗	Open AMR
src/saber_tidi.F	✗	Open AMR
src/settei.F	✗	Open AMR
src/smooth.F	✗	Open AMR
src/soldata.F	✗	Open AMR
src/sphpac.F	✗	Open AMR
src/swdot.F	✗	Open AMR
src/tgcm.F	✗	Open AMR
src/timing.F	✗	Open AMR
src/timing_mpi.F	✓	Open AMR
src/trsolv.F	✗	Open AMR
src/util.F	✗	Open AMR
src/vtsetup.F	✓	Open AMR
src/wei05sc.F	✗	Open AMR
src/wrhist.F	✗	Open AMR
tgcmrun/classes.py	✗	Open AMR
tgcmrun/getoptions.py	✗	Open AMR
tgcmrun/utils.py	✗	Open AMR